RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

yggX.mltC.IGT

Flanking gene IDs:

  • G7532
  • G7533

Summary:

Name ID Genomic annotation Chromosome Strand
yggX.mltC.IGT G7532.G7533.IGT IGT chr +

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 877 1.00 0.00 3
Stat. Phase (Melamed et al. 2016) 1 33 0.00 -1.00 3
Iron Limitation (Melamed et al. 2016) 1 1040 1.00 0.00 3

Interaction table:

Name Genomic annotation Exponential Phase Stationary Phase Iron Limitation
gcvB sRNA Show interaction Show interaction Show interaction