RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

ygaM.EST3UTR

Summary:

Name ID Genomic annotation Chromosome Strand
ygaM.EST3UTR G7400.EST3UTR 3UTR chr +

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Stat. Phase (Melamed et al. 2016) 1 190 1.00 0.00 5
Iron Limitation (Melamed et al. 2016) 1 27 1.00 0.00 5

Interaction table:

Name Genomic annotation Stationary Phase Iron Limitation
micA sRNA Show interaction
rpsF.5UTR 5UTR Show interaction