RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

msrC

Summary:

Name ID Genomic annotation Chromosome Strand
msrC G7005 CDS chr -

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 17 0.00 -1.00 4
Stat. Phase (Melamed et al. 2016) 1 128 0.00 -1.00 4
Iron Limitation (Melamed et al. 2016) 2 120 0.00 -0.50 4

Interaction table:

Name Genomic annotation Exponential Phase Stationary Phase Iron Limitation
micA sRNA Show interaction Show interaction
motA.5UTR 5UTR Show interaction Show interaction