RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

folM.EST3UTR

Summary:

Name ID Genomic annotation Chromosome Strand
folM.EST3UTR G6862.EST3UTR 3UTR chr +

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 49 0.00 -1.00 2
Stat. Phase (Melamed et al. 2016) 1 97 0.00 -1.00 3
Iron Limitation (Melamed et al. 2016) 1 113 0.00 -1.00 3

Interaction table:

Name Genomic annotation Exponential Phase Stationary Phase Iron Limitation
arcZ sRNA Show interaction Show interaction Show interaction