RILseqDB

NOTE: You are currently using E. coli K-12 database, click here to select another bacterium or configure it later by clicking the sign at the right top corner

Some transcripts interact with the RNA untranslated regions: bhsA.EST3UTR

Name	ID	Genomic annotation	Chromosome	Strand
bhsA	G6570	CDS	chr	+

Library	# of unique Interactions	# of chimeric fragments	Fraction as 2nd	SIC score	Longest U-tract
Exp. Phase (Melamed et al. 2016)	2	44	1.00	0.50	7
Stat. Phase (Melamed et al. 2016)	2	245	1.00	0.50	7
Iron Limitation (Melamed et al. 2016)	2	94	1.00	0.50	7

Name	Genomic annotation	Exponential Phase	Stationary Phase	Iron Limitation
ompC	CDS	—	Show interaction	—
ompC.5UTR	5UTR	Show interaction	Show interaction	Show interaction
ompF.5UTR	5UTR	Show interaction	—	Show interaction
rybB	sRNA	—	Show interaction	—