RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

rihA

Summary:

Name ID Genomic annotation Chromosome Strand
rihA G6358 CDS chr -

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 85 1.00 0.00 2
Stat. Phase (Melamed et al. 2016) 1 14 1.00 0.00 2
Iron Limitation (Melamed et al. 2016) 1 155 1.00 0.00 2

Interaction table:

Name Genomic annotation Exponential Phase Stationary Phase Iron Limitation
gcvB sRNA Show interaction Show interaction Show interaction