RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

rdlA.ldrB.IGR

Flanking gene IDs:

  • G0-9603
  • G0-9605

Summary:

Name ID Genomic annotation Chromosome Strand
rdlA.ldrB.IGR G0-9603.G0-9605.IGR IGR chr +

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 18 1.00 0.00 4
Iron Limitation (Melamed et al. 2016) 1 14 0.00 -1.00 4

Interaction table:

Name Genomic annotation Exponential Phase Iron Limitation
arcZ sRNA Show interaction
ychH.5UTR 5UTR Show interaction