RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

ylcI.ybcW.IGR

Flanking gene IDs:

  • G0-10585
  • G6314

Summary:

Name ID Genomic annotation Chromosome Strand
ylcI.ybcW.IGR G0-10585.G6314.IGR IGR chr -

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 26 0.00 -1.00 4
Stat. Phase (Melamed et al. 2016) 1 82 0.00 -1.00 4
Iron Limitation (Melamed et al. 2016) 1 18 0.00 -1.00 4

Interaction table:

Name Genomic annotation Exponential Phase Stationary Phase Iron Limitation
arcZ sRNA Show interaction Show interaction Show interaction