RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

opgD.EST5UTR

Summary:

Name ID Genomic annotation Chromosome Strand
opgD.EST5UTR EG12859.EST5UTR 5UTR chr +

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 14 0.00 -1.00 3
Stat. Phase (Melamed et al. 2016) 1 77 0.00 -1.00 3
Iron Limitation (Melamed et al. 2016) 1 69 0.00 -1.00 3

Interaction table:

Name Genomic annotation Exponential Phase Stationary Phase Iron Limitation
arcZ sRNA Show interaction Show interaction Show interaction