RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

yhjY.tag.IGR

Flanking gene IDs:

  • EG12269
  • EG10986

Summary:

Name ID Genomic annotation Chromosome Strand
yhjY.tag.IGR EG12269.EG10986.IGR IGR chr +

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 19 0.00 -1.00 8
Stat. Phase (Melamed et al. 2016) 1 15 0.00 -1.00 8
Iron Limitation (Melamed et al. 2016) 1 17 0.00 -1.00 8

Interaction table:

Name Genomic annotation Exponential Phase Stationary Phase Iron Limitation
arcZ sRNA Show interaction Show interaction Show interaction