RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

ydcF

Summary:

Name ID Genomic annotation Chromosome Strand
ydcF EG12110 CDS chr +

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 34 0.00 -1.00 6
Stat. Phase (Melamed et al. 2016) 1 64 0.00 -1.00 6
Iron Limitation (Melamed et al. 2016) 1 49 0.00 -1.00 6

Interaction table:

Name Genomic annotation Exponential Phase Stationary Phase Iron Limitation
mcaS sRNA Show interaction Show interaction Show interaction