RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

bglX.osmF.IGR

Flanking gene IDs:

  • EG12013
  • EG12012

Summary:

Name ID Genomic annotation Chromosome Strand
bglX.osmF.IGR EG12013.EG12012.IGR IGR chr -

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 12 0.00 -1.00 3
Stat. Phase (Melamed et al. 2016) 1 1103 0.00 -1.00 4
Iron Limitation (Melamed et al. 2016) 1 71 0.00 -1.00 3

Interaction table:

Name Genomic annotation Exponential Phase Stationary Phase Iron Limitation
arcZ sRNA Show interaction Show interaction Show interaction