RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

emrD.tisB.IGR

Flanking gene IDs:

  • EG11693
  • G0-9962

Summary:

Name ID Genomic annotation Chromosome Strand
emrD.tisB.IGR EG11693.G0-9962.IGR IGR chr -

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 11 0.00 -1.00 3
Stat. Phase (Melamed et al. 2016) 1 37 0.00 -1.00 4
Iron Limitation (Melamed et al. 2016) 1 106 0.00 -1.00 4

Interaction table:

Name Genomic annotation Exponential Phase Stationary Phase Iron Limitation
arcZ sRNA Show interaction Show interaction Show interaction