RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

yicL

Summary:

Name ID Genomic annotation Chromosome Strand
yicL EG11688 CDS chr +

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 72 0.00 -1.00 7
Stat. Phase (Melamed et al. 2016) 1 40 0.00 -1.00 7
Iron Limitation (Melamed et al. 2016) 1 73 0.00 -1.00 7

Interaction table:

Name Genomic annotation Exponential Phase Stationary Phase Iron Limitation
cyaR sRNA Show interaction Show interaction Show interaction