RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

narP.ccmH.IGR

Flanking gene IDs:

  • EG11527
  • EG12052

Summary:

Name ID Genomic annotation Chromosome Strand
narP.ccmH.IGR EG11527.EG12052.IGR IGR chr +

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 2 46 1.00 0.50 5
Stat. Phase (Melamed et al. 2016) 5 368 1.00 0.80 7
Iron Limitation (Melamed et al. 2016) 2 70 1.00 0.50 5

Interaction table: