RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

yifK.EST5UTR

Summary:

Name ID Genomic annotation Chromosome Strand
yifK.EST5UTR EG11459.EST5UTR 5UTR chr +

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 1397 0.00 -1.00 6
Stat. Phase (Melamed et al. 2016) 1 169 0.00 -1.00 5
Iron Limitation (Melamed et al. 2016) 1 2361 0.00 -1.00 6

Interaction table:

Name Genomic annotation Exponential Phase Stationary Phase Iron Limitation
gcvB sRNA Show interaction Show interaction Show interaction