RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

yceD

Summary:

Name ID Genomic annotation Chromosome Strand
yceD EG11119 CDS chr +

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Stat. Phase (Melamed et al. 2016) 1 12 0.00 -1.00 3
Iron Limitation (Melamed et al. 2016) 1 24 0.00 -1.00 2

Interaction table:

Name Genomic annotation Stationary Phase Iron Limitation
omrB sRNA Show interaction
ryeA ncRNA Show interaction