RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

ssb.5UTR

Summary:

Name ID Genomic annotation Chromosome Strand
ssb.5UTR EG10976.5UTR 5UTR chr +

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 41 0.00 -1.00 7
Stat. Phase (Melamed et al. 2016) 1 22 0.00 -1.00 7
Iron Limitation (Melamed et al. 2016) 1 41 0.00 -1.00 7

Interaction table:

Name Genomic annotation Exponential Phase Stationary Phase Iron Limitation
arrS cASt Show interaction
cyaR sRNA Show interaction Show interaction