RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

yjdM

Summary:

Name ID Genomic annotation Chromosome Strand
yjdM EG10711 CDS chr -

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 93 0.00 -1.00 6
Stat. Phase (Melamed et al. 2016) 1 135 0.00 -1.00 6
Iron Limitation (Melamed et al. 2016) 1 117 0.00 -1.00 6

Interaction table:

Name Genomic annotation Exponential Phase Stationary Phase Iron Limitation
sucD.EST3UTR 3UTR Show interaction Show interaction Show interaction