RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

nirC

Summary:

Name ID Genomic annotation Chromosome Strand
nirC EG10654 CDS chr +

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 12 0.00 -1.00 3
Iron Limitation (Melamed et al. 2016) 1 15 0.00 -1.00 3

Interaction table:

Name Genomic annotation Exponential Phase Iron Limitation
cyaR sRNA Show interaction
narK.narG.IGR IGR Show interaction