RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

glpD.5UTR

Summary:

Name ID Genomic annotation Chromosome Strand
glpD.5UTR EG10394.5UTR 5UTR chr +

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 58 0.00 -1.00 6
Stat. Phase (Melamed et al. 2016) 1 115 0.00 -1.00 4
Iron Limitation (Melamed et al. 2016) 1 97 0.00 -1.00 3

Interaction table:

Name Genomic annotation Exponential Phase Stationary Phase Iron Limitation
mgrR sRNA Show interaction Show interaction Show interaction