RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

ftsZ

Summary:

Name ID Genomic annotation Chromosome Strand
ftsZ EG10347 CDS chr +

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 61 0.00 -1.00 3
Stat. Phase (Melamed et al. 2016) 1 51 1.00 0.00 5
Iron Limitation (Melamed et al. 2016) 1 100 0.00 -1.00 3

Interaction table:

Name Genomic annotation Exponential Phase Stationary Phase Iron Limitation
allR CDS Show interaction
cyaR sRNA Show interaction Show interaction