RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

deoD

Summary:

Name ID Genomic annotation Chromosome Strand
deoD EG10222 CDS chr +

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Stat. Phase (Melamed et al. 2016) 1 17 0.00 -1.00 4
Iron Limitation (Melamed et al. 2016) 2 95 0.50 0.00 5

Interaction table:

Name Genomic annotation Stationary Phase Iron Limitation
flgL CDS Show interaction
gcvH CDS Show interaction
malG.3UTR 3UTR Show interaction