RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

aspC.ycbL.IGR

Flanking gene IDs:

  • EG10096
  • G6475

Summary:

Name ID Genomic annotation Chromosome Strand
aspC.ycbL.IGR EG10096.G6475.IGR IGR chr -

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 38 0.00 -1.00 4
Stat. Phase (Melamed et al. 2016) 1 2712 0.00 -1.00 4
Iron Limitation (Melamed et al. 2016) 1 191 0.00 -1.00 4

Interaction table:

Name Genomic annotation Exponential Phase Stationary Phase Iron Limitation
arcZ sRNA Show interaction Show interaction Show interaction