RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

aroP.5UTR

Summary:

Name ID Genomic annotation Chromosome Strand
aroP.5UTR EG10084.5UTR 5UTR chr -

Library breakdown:

Library # of unique Interactions # of chimeric fragments Fraction as 2nd SIC score Longest U-tract
Exp. Phase (Melamed et al. 2016) 1 171 0.00 -1.00 5
Stat. Phase (Melamed et al. 2016) 1 18 0.00 -1.00 5
Iron Limitation (Melamed et al. 2016) 1 282 0.00 -1.00 5

Interaction table:

Name Genomic annotation Exponential Phase Stationary Phase Iron Limitation
gcvB sRNA Show interaction Show interaction Show interaction