RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

cpxP.3UTR - bamA.skp.IGT interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
cpxP.3UTR bamA.skp.IGT 3UTR IGT chr + 4106329 4106347 chr + 200415 200495 72 57.9
bamA.skp.IGT cpxP.3UTR IGT 3UTR chr + 200249 200698 chr + 4106079 4106388 514 61.5

cpxP.3UTR reads

bamA.skp.IGT reads