RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

cpxP.3UTR - bamA.skp.IGT interactions in library 'Stationary Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
cpxP.3UTR bamA.skp.IGT 3UTR IGT chr + 4106304 4106346 chr + 200411 200495 60 11.8
bamA.skp.IGT cpxP.3UTR IGT 3UTR chr + 200211 200698 chr + 4106272 4106387 837 25.8

cpxP.3UTR reads

bamA.skp.IGT reads