RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

cpxP.3UTR - glpT interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
glpT cpxP.3UTR CDS 3UTR chr - 2351889 2352362 chr + 4106311 4106387 89 2.8
glpT cpxP.3UTR CDS 3UTR chr - 2350997 2351273 chr + 4106366 4106387 44 5.8

cpxP.3UTR reads

glpT reads