RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

cpxP.3UTR - glpT interactions in library 'Exponential Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
glpT cpxP.3UTR CDS 3UTR chr - 2352281 2352345 chr + 4106330 4106387 43 4.4
glpT cpxP.3UTR CDS 3UTR chr - 2351116 2351250 chr + 4106079 4106387 41 7.4

cpxP.3UTR reads

glpT reads