RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

fliY.fliZ.IGT - gcvB interactions in library 'Stationary Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
gcvB fliY.fliZ.IGT sRNA IGT chr + 2942696 2942753 chr - 2000379 2000441 18 8.6
fliY.fliZ.IGT gcvB IGT sRNA chr - 2000378 2000470 chr + 2942719 2942866 53 6.0

fliY.fliZ.IGT reads

gcvB reads