RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

paaX - cpxP.3UTR interactions in library 'Stationary Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
paaX cpxP.3UTR CDS 3UTR chr + 1463695 1463874 chr + 4106367 4106388 179 29.3
paaX cpxP.3UTR CDS 3UTR chr + 1463253 1463675 chr + 4106354 4106387 28 4.4

paaX reads

cpxP.3UTR reads