RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

ghrA - fnrS interactions in library 'Exponential Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
ghrA fnrS CDS sRNA chr + 1097807 1097875 chr + 1409159 1409249 80 3.7
fnrS ghrA sRNA CDS chr + 1409128 1409175 chr + 1097831 1097945 39 3.5

ghrA reads

fnrS reads