RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

blr - arcZ interactions in library 'Exponential Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
blr arcZ CDS sRNA chr + 1704511 1704768 chr + 3350679 3350698 36 3.4
arcZ blr sRNA CDS chr + 3350641 3350651 chr + 1704681 1704751 26 4.9

blr reads

arcZ reads