RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

arcZ - sucD interactions in library 'Exponential Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
sucD arcZ CDS sRNA chr + 764178 764227 chr + 3350664 3350698 45 2.9
arcZ sucD sRNA CDS chr + 3350641 3350644 chr + 764219 764264 46 4.2

arcZ reads

sucD reads