RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

arcZ - glpT interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
glpT arcZ CDS sRNA chr - 2352281 2352377 chr + 3350672 3350698 270 7.1
glpT arcZ CDS sRNA chr - 2351779 2352075 chr + 3350671 3350698 209 1.8
arcZ glpT sRNA CDS chr + 3350613 3350646 chr - 2352182 2352278 110 3.2

arcZ reads

glpT reads