RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

arcZ - glpT interactions in library 'Exponential Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
glpT arcZ CDS sRNA chr - 2352281 2352372 chr + 3350665 3350698 117 3.0
arcZ glpT sRNA CDS chr + 3350623 3350657 chr - 2352181 2352277 291 4.5

arcZ reads

glpT reads