RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

gcvB - yggX.mltC.IGT interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
yggX.mltC.IGT gcvB IGT sRNA chr + 3104284 3104478 chr + 2942717 2942873 709 4.7
gcvB yggX.mltC.IGT sRNA IGT chr + 2942695 2942775 chr + 3104383 3104478 331 3.5

gcvB reads

yggX.mltC.IGT reads