RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

gcvB - gltI.5UTR interactions in library 'Exponential Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
gltI.5UTR gcvB 5UTR sRNA chr - 687787 687868 chr + 2942716 2942871 211 3.3
gcvB gltI.5UTR sRNA 5UTR chr + 2942695 2942778 chr - 687681 687839 232 5.4

gcvB reads

gltI.5UTR reads