RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

gcvB - cycA.5UTR interactions in library 'Stationary Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
gcvB cycA.5UTR sRNA 5UTR chr + 2942695 2942858 chr + 4429819 4430031 185 3.8
cycA.5UTR gcvB 5UTR sRNA chr + 4429771 4430168 chr + 2942717 2942902 618 9.7

gcvB reads

cycA.5UTR reads