RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

gcvB - gatY interactions in library 'Stationary Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
gcvB gatY sRNA CDS chr + 2942696 2942861 chr - 2177081 2177211 393 7.1
gatY gcvB CDS sRNA chr - 2177182 2177229 chr + 2942716 2942776 50 8.5

gcvB reads

gatY reads