RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

gcvB - hisQ.hisJ.IGT interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
hisQ.hisJ.IGT gcvB IGT sRNA chr - 2425891 2426048 chr + 2942879 2942902 350 4.6
hisQ.hisJ.IGT gcvB IGT sRNA chr - 2425806 2426041 chr + 2942805 2942878 133 2.0

gcvB reads

hisQ.hisJ.IGT reads