RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

gcvB - hisQ.hisJ.IGT interactions in library 'Stationary Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
hisQ.hisJ.IGT gcvB IGT sRNA chr - 2425888 2426067 chr + 2942796 2942902 322 7.7
gcvB hisQ.hisJ.IGT sRNA IGT chr + 2942782 2942867 chr - 2425846 2425972 97 3.3

gcvB reads

hisQ.hisJ.IGT reads