RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

gcvB - thrL.5UTR interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
thrL.5UTR gcvB 5UTR sRNA chr + 103 252 chr + 2942718 2942878 922 1.3
gcvB thrL.5UTR sRNA 5UTR chr + 2942779 2942853 chr + 169 200 260 2.6

gcvB reads

thrL.5UTR reads