RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

gcvB - aroC.prmB.IGT interactions in library 'Stationary Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
gcvB aroC.prmB.IGT sRNA IGT chr + 2942696 2942770 chr - 2447403 2447531 63 10.6
aroC.prmB.IGT gcvB IGT sRNA chr - 2447387 2447628 chr + 2942718 2942871 122 9.5

gcvB reads

aroC.prmB.IGT reads