RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

fnrS - ytfK interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
ytfK fnrS CDS sRNA chr + 4439412 4439864 chr + 1409149 1409251 3649 11.3
fnrS ytfK sRNA CDS chr + 1409127 1409224 chr + 4439778 4439865 285 5.1

fnrS reads

ytfK reads