RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

fnrS - ytfK interactions in library 'Exponential Phase':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
ytfK fnrS CDS sRNA chr + 4439412 4439865 chr + 1409152 1409250 9873 5.4
fnrS ytfK sRNA CDS chr + 1409177 1409226 chr + 4439778 4439895 402 1.9

fnrS reads

ytfK reads