RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

mgrR - ycbZ interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
ycbZ mgrR CDS sRNA chr - 1018281 1018327 chr - 1622817 1622868 146 118.7
ycbZ mgrR CDS sRNA chr - 1017604 1017765 chr - 1622823 1622867 18 11.3
mgrR ycbZ sRNA CDS chr - 1622857 1622915 chr - 1018214 1018301 12 13.7

mgrR reads

ycbZ reads