RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

mgrR - alaX interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
mgrR alaX sRNA tRNA chr - 1622867 1622915 chr - 2518079 2518084 97 17.8
mgrR alaX sRNA tRNA chr - 1622857 1622876 chr - 2518042 2518078 24 5.9
alaX mgrR tRNA sRNA chr - 2518079 2518173 chr - 1622817 1622889 113 3.2

mgrR reads

alaX reads