RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

mgrR - eptB.5UTR interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
mgrR eptB.5UTR sRNA 5UTR chr - 1622853 1622875 chr - 3710405 3710533 158 59.3
eptB.5UTR mgrR 5UTR sRNA chr - 3710251 3710584 chr - 1622816 1622891 6462 172.9

mgrR reads

eptB.5UTR reads