RILseqDB

A database of Hfq-mediated RNA interactions determined by RIL-seq

Interaction Data

mgrR - nlpD interactions in library 'Iron Limitation':

Name Genomic annotation RNA1 RNA2
RNA1 RNA2 RNA1 RNA2 Chromosome Strand Start of first read Start of last read Chromosome Strand Start of last read Start of first read Interactions Odds Ratio
nlpD mgrR CDS sRNA chr - 2867579 2868075 chr - 1622817 1622873 1705 8.7
nlpD mgrR CDS sRNA chr - 2868079 2868126 chr - 1622817 1622865 66 2.6
mgrR nlpD sRNA CDS chr - 1622855 1622876 chr - 2867479 2867775 80 5.2

mgrR reads

nlpD reads